Installation | Data Requirements and Validation | Using artfishr for Small-Scale Fisheries Estimation | Statistical framework of the ARTFISH methodology | Artfish visualisations | Exemple of use

1. Introduction | 2. Overview of ARTFISH data formats | 3. Identify your sampling strategy for calculate the effort | 4. Creating empty data templates | 5. Validating input datasets | 6. Summary and recommendations | 7. References

Introduction | Data preparation | Identify data collection strategy | Step-by-step ARTFISH workflow | 1. Effort Activity Coefficient | 2. Effort Estimate | 3. Catch per Unit of Effort (CPUE) | 4. Catch Estimate | 5. Catch Estimate by Species | Using the unified workflow | Interpreting results | Summary

Introduction | Artfish - Total Catch and Effort | Artfish - Catch and Effort by Fishing Unit | Artfish - Catch and Effort by Species | Summary | Appendix | Annex A - Figure Box and Chart Additional Features | Window and Layout Controls | Chart Legend and Interactions | Chart Toolbar Action Buttons

1. Introduction | 2. ARTFISH methodology | 2.1 Presentation of the generic formula | 2.2 Stratification | 3. CPUE | $$\mathrm | \frac | \frac | 4. Effort | 4.1 Presentation | $$\mathrm | 4.2 Number of active vessels: Estimation of the raising factor expressing the total number of active fishing units ($F$) | $$F_ | 4.3 Number of active days: Estimation of the time raising factor ($D$) | $$D_ | \text | 4.4 Activity coefficient: Estimation of the boat activity coefficient ($BAC$) or fishing activity coefficient ($FAC$) | 4.4.1 Difference between $BAC$ and $FAC$ | 4.4.2 Boat activity coefficient | $$BAC_ | 4.4.3 Fishing activity coefficient | $$FAC_ | 5. Total catch estimation and catch per species | 5.1 Catch per species per stratum | $$SpeciesCatch | 5.2 Total catch estimation | $$TotalCatch | 6. Estimation quality control | 7 References

geosapi - R Interface to GeoServer REST API | 1. Overview and vision | 2. Development status | 3. Credits | 4. User guide | 4.1 How to install geosapi in R | 4.2 Connect to GeoServer REST API | 4.3 Manipulate GeoServer workspaces | 4.3.1 Get a (list of) workspace(s) | 4.3.2 Create a new workspace | 4.3.3 Update an existing workspace | 4.3.4 Delete an existing workspace | 4.4 Manipulate GeoServer namespaces | 4.4.1 Get a (list of) namespace(s) | 4.4.2 Create a new namespace | 4.4.3 Update an existing namespace | 4.4.4 Delete an existing namespace | 4.5 Manage vector data with GeoServer | 4.5.1 Manipulate GeoServer dataStores | 4.5.1.1 Get a (list of) dataStore(s) | 4.5.1.2 Create a new dataStore | 4.5.1.3 Update an existing dataStore | 4.5.1.4 Delete an existing dataStore | 4.5.2 Upload features/vector data | 4.5.3 Manipulate GeoServer featureType | 4.5.3.1 Get a (list of) featureType(s) | 4.5.3.2 Create a new featureType | 4.5.3.3 Update an existing featureType | 4.5.3.4 Delete an existing featureType | 4.5.4 Manipulate GeoServer layers | 4.5.4.1 Get a (list of) layer(s) | 4.5.4.2 Create a new layer | 4.5.4.3 Update an existing layer | 4.5.4.4 Delete an existing layer | 4.5.5 Publication of GeoServer feature layer | 4.5.5.1 Publish Geoserver feature layer | 4.5.5.2 Unpublish Geoserver feature layer | 4.5.6 Manipulate GeoServer layer groups | 4.5.6.1 Get a (list of) layer group(s) | 4.5.6.2 Create a new layer group | 4.5.6.3 Update an existing layer group | 4.5.6.4 Delete an existing layer group | 4.6. Manage raster data with GeoServer | 4.6.1 Manipulate GeoServer coveragestores | 4.6.1.1 Get a (list of) coveragestore(s) | 4.6.1.2 Create a new coveragetore | 4.6.1.3 Update an existing coveragestore | 4.6.1.4 Delete an existing coveragestore | 4.6.2 Upload coverage/raster data | 4.6.3 Manipulate GeoServer coverages | 4.6.3.1 Get a (list of) coverage(s) | 4.6.3.2 Create a new coverage | 4.6.3.3 Update an existing coverage | 4.6.3.4 Delete an existing coverage | 4.7. Manage styles with GeoServer | 4.7.1 Get a (list of) style(s) | 4.7.2 Create a new style | 4.7.3 Update a new style | 4.7.4 Delete an existing style | 4.8. Manage workspace settings with GeoServer | 4.8.1 Create a workspace settings | 4.8.2 Get a workspace settings | 4.8.3 Update a workspace settings | 4.8.4 Delete a workspace settings | 4.9 Manage OGC Service (WMS/WFS/WCS) settings with GeoServer | 4.9.1 Get an OGC service (WMS/WFS/WCS) settings | 4.9.2 Update an OGC service (WMS/WFS/WCS) settings | 4.9.3 Enable/Disable an OGC service (WMS/WFS/WCS) | 5. Issue reporting

zen4R - R Interface to Zenodo REST API | 1. Overview and vision | 2. Development status | 3. Credits | 4. User guide | 4.1 How to install zen4R in R | 4.2 Connect to Zenodo REST API | 4.3 Query Zenodo deposited records | 4.3.1 Get Depositions | 4.3.2 Get Deposition By Concept DOI | 4.3.3 Get Deposition By DOI | 4.3.4 Get Deposition By Zenodo ID | 4.3.4 Get versions of a Zenodo record | 4.4 Manage Zenodo record depositions | 4.4.1 Create an empty record | 4.4.2 Fill a record | 4.4.3 Deposit/update a record | 4.4.4 Delete a record | 4.4.5 Publish a record | 4.4.6 Edit/Update a published record | 4.4.7 Discard changes of a draft record | 4.4.8 Create a new version record | 4.5 Manage Zenodo record deposition files | 4.5.1 Upload file | 4.5.2 Get files | 4.5.3 Delete file | 4.6 Manage Zenodo record deposition files | 4.6.1 Submit a published record to communities | 4.6.2 Submit a draft record to a community | 4.7 Export Zenodo record metadata | 4.7.1 Export Zenodo record metadata by format | 4.7.2 Export Zenodo record metadata - all formats | 4.8 Browse Zenodo controlled vocabularies | 4.8.1 Communities | 4.8.2 Licenses | 4.8.3 Funders | 4.8.4 Grants / Awards | 4.9 Query Zenodo published records | 4.9.1 Get Records | 4.9.2 Get Record By Concept DOI | 4.9.3 Get Record By DOI | 4.9.4 Get Record By Zenodo ID | 4.10 Download files from Zenodo records | 4.11 Manage requests | 5. Issue reporting | 6. User support

Create WCS Client | Get Capabilities (GetCapabilities) | Get coverage summaries | Describe a coverage (DescribeCoverage) | Get coverage data (GetCoverage) | Download coverage data files | Comparing data get from WCS (GetCoverage) vs. WMS (GetFeatureInfo)

Create CSW Client | Get Capabilities (GetCapabilities) | Describe a record (DescribeRecord) | Get a record (GetRecordById) | Get records (GetRecords) | Basic query | Query with maxRecords parameter | Query with CQL filters | Query with OGC filters | Transaction - Insert,Update,Delete (Transaction)

SDMX - a short introduction | How to deal with SDMX in R | Install rsdmx | Load rsdmx | Read dataset documents | Read remote datasets | using the raw approach (specifying the complete request URL) | using the helper approach | Read local datasets | Read metadata documents | Data Structure Definition (DSD) | Save & Reload SDMX R objects

1. Overview and vision | 2. Development status | 3. Credits | 4. User guide | 4.1 How to install geonode4R in R | 4.2 Connect to GeoNode REST API | 4.3 Create a resource | 4.4 Read a resource | 4.5 Delete a resource | 5. Issue reporting

Install cleangeo | Load cleangeo | Work with cleangeo